PH01004348G0070's details annotation
1.Annotation
ICBR annotation: ethylene-insensitive 3, putative, expressed
Blast result AT2G27050 : 1.60E-87
Blast annotation: ETHYLENE-INSENSITIVE3-like 1
2.Location
Scaffold: PH01004348
Strand: -
| Region | Start | End |
| gene | 53629 | 56375 |
| mRNA | 53629 | 56375 |
| exon | 53629 | 55014 |
| exon | 55207 | 56375 |
| CDS | 53971 | 55014 |
| CDS | 55207 | 55782 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | EIL |
| Transcription_Regulator(from PlantTFDB) | EIL |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04873.12 | EIN3 | 66 | 190 |
| PF04873.12 | EIN3 | 194 | 263 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003700 | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | nucleus |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.