PH01004351G0010's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G24160 : 1.10E-59
Blast annotation: putative type 1 membrane protein
2.Location
Scaffold: PH01004351
Strand: +
| Region | Start | End |
| gene | 2721 | 7968 |
| mRNA | 2721 | 7968 |
| exon | 2721 | 3451 |
| exon | 3553 | 3630 |
| exon | 4330 | 4405 |
| exon | 4498 | 4584 |
| exon | 4713 | 4801 |
| exon | 4890 | 4982 |
| exon | 6483 | 6620 |
| exon | 7752 | 7968 |
| CDS | 3389 | 3451 |
| CDS | 3553 | 3630 |
| CDS | 4330 | 4405 |
| CDS | 4498 | 4584 |
| CDS | 4713 | 4801 |
| CDS | 4890 | 4982 |
| CDS | 6483 | 6620 |
| CDS | 7752 | 7820 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.