PH01004394G0040's details annotation
1.Annotation
ICBR annotation: cytokinin-O-glucosyltransferase 1, putative, expressed
Blast result AT2G16890 : 3.00E-109
Blast annotation: UDP-Glycosyltransferase superfamily protein
2.Location
Scaffold: PH01004394
Strand: -
| Region | Start | End |
| gene | 47051 | 48828 |
| mRNA | 47051 | 48828 |
| exon | 47051 | 48828 |
| CDS | 47153 | 48589 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000182 | 3-deoxy-7-phosphoheptulonate synthase activity, aromatic amino acid family biosynthetic process, Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis Phenylalanine,_tyrosine_and_tryptophan_biosynthesis sphingolipid metabolic process, glucosylceramide catabolic process, GH116 Glycoside_Hydrolases Flavonoid_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT1 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00201.17 | UDPGT | 279 | 449 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.