PH01004414G0160's details annotation
1.Annotation
ICBR annotation: growth regulator related protein, putative, expressed
Blast result AT5G01100 : 3.00E-156
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01004414
Strand: +
| Region | Start | End |
| gene | 91957 | 95944 |
| mRNA | 91957 | 95944 |
| exon | 91957 | 93575 |
| exon | 93709 | 93779 |
| exon | 93865 | 93953 |
| exon | 94031 | 94163 |
| exon | 94275 | 94504 |
| exon | 94602 | 95078 |
| exon | 95154 | 95944 |
| CDS | 93521 | 93575 |
| CDS | 93709 | 93779 |
| CDS | 93865 | 93953 |
| CDS | 94031 | 94163 |
| CDS | 94275 | 94504 |
| CDS | 94602 | 95078 |
| CDS | 95154 | 95358 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 27 | 341 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.