Gene details

Annotation of co-expression genes

PH01004450G0130's details annotation

1.Annotation

ICBR annotation: OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed

Blast result AT2G29080 : 0.00E+00
Blast annotation: FTSH protease 3

2.Location

Scaffold: PH01004450
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000154	GT37 GlycosylTransferases cell wall biogenesis, cell death, protein catabolic process, Various_types_of_N-glycan_biosynthesis N-Glycan_biosynthesis galactoside 2-alpha-L-fucosyltransferase activity, integral to membrane, membrane, mRNA_surveillance_pathway
coexpression network	CFinderM001690	GT37 GlycosylTransferases cell wall biogenesis, proteolysis, protein catabolic process, Various_types_of_N-glycan_biosynthesis N-Glycan_biosynthesis galactoside 2-alpha-L-fucosyltransferase activity, mRNA_surveillance_pathway

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0004222	metalloendopeptidase activity
GO:0005524	ATP binding
GO:0006508	proteolysis
GO:0008270	zinc ion binding
GO:0016020	membrane
GO:0016021	integral to membrane
GO:0017111	nucleoside-triphosphatase activity
GO:0030163	protein catabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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