PH01004484G0060's details annotation
1.Annotation
ICBR annotation: glutathione S-transferase, putative, expressed
Blast result AT1G02920 : 1.30E-41
Blast annotation: glutathione S-transferase 7
2.Location
Scaffold: PH01004484
Strand: -
| Region | Start | End |
| gene | 47116 | 50280 |
| mRNA | 47116 | 50280 |
| exon | 47116 | 47642 |
| exon | 47737 | 47785 |
| exon | 48038 | 48197 |
| exon | 48841 | 50280 |
| CDS | 47194 | 47642 |
| CDS | 47737 | 47785 |
| CDS | 48038 | 48197 |
| CDS | 48841 | 49520 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02798.19 | GST_N | 233 | 307 |
| PF00043.24 | GST_C | 344 | 432 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.