Gene details

Annotation of co-expression genes

PH01004488G0110's details annotation

1.Annotation

ICBR annotation: GTPase-activating protein, putative, expressed

Blast result AT4G13350 : 1.30E-58
Blast annotation: NSP (nuclear shuttle protein)-interacting GTPase

2.Location

Scaffold: PH01004488
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000057	RLK-Pelle_LysM (from iTAK) protein phosphorylation, STE_STE20-Pl (from iTAK) RLK-Pelle_LRR-VIII-1 (from iTAK) transferase activity, transferring phosphorus-containing groups, protein kinase activity, regulation of ARF GTPase activity, ATP binding, ARF GTPase activator activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01412.17	ArfGap	13	103

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0008060	ARF GTPase activator activity
GO:0008270	zinc ion binding
GO:0032312	regulation of ARF GTPase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.