PH01004618G0100's details annotation
1.Annotation
ICBR annotation: YGGT family protein, putative, expressed
Blast result AT5G21920 : 5.10E-42
Blast annotation: YGGT family protein
2.Location
Scaffold: PH01004618
Strand: +
| Region | Start | End |
| gene | 52805 | 54719 |
| mRNA | 52805 | 54719 |
| exon | 52805 | 53623 |
| exon | 54079 | 54719 |
| CDS | 53427 | 53623 |
| CDS | 54079 | 54352 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02325.16 | YGGT | 119 | 183 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.