PH01004655G0030's details annotation
1.Annotation
ICBR annotation: 3-oxoacyl-synthase, putative, expressed
Blast result AT1G74960 : 4.40E-40
Blast annotation: fatty acid biosynthesis 1
2.Location
Scaffold: PH01004655
Strand: -
| Region | Start | End |
| gene | 39385 | 45256 |
| mRNA | 39385 | 45256 |
| exon | 39385 | 40011 |
| exon | 40331 | 40410 |
| exon | 40536 | 40581 |
| exon | 40660 | 40755 |
| exon | 41699 | 41956 |
| exon | 42302 | 45256 |
| CDS | 39919 | 40011 |
| CDS | 40331 | 40410 |
| CDS | 40536 | 40581 |
| CDS | 40660 | 40755 |
| CDS | 41699 | 41956 |
| CDS | 42302 | 42364 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00109.25 | ketoacyl-synt | 108 | 203 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0008152 | metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.