PH01004753G0080's details annotation
1.Annotation
ICBR annotation: CRAL/TRIO domain containing protein, expressed
Blast result AT1G55840 : 1.10E-66
Blast annotation: Sec14p-like phosphatidylinositol transfer family protein
2.Location
Scaffold: PH01004753
Strand: -
| Region | Start | End |
| gene | 44779 | 50791 |
| mRNA | 44779 | 50791 |
| exon | 44779 | 46029 |
| exon | 46275 | 46370 |
| exon | 46446 | 46505 |
| exon | 46786 | 46839 |
| exon | 46939 | 47016 |
| exon | 48499 | 48552 |
| exon | 48639 | 48722 |
| exon | 50308 | 50336 |
| exon | 50453 | 50791 |
| CDS | 45928 | 46029 |
| CDS | 46275 | 46370 |
| CDS | 46446 | 46505 |
| CDS | 46786 | 46839 |
| CDS | 46939 | 47016 |
| CDS | 48499 | 48552 |
| CDS | 48639 | 48722 |
| CDS | 50308 | 50336 |
| CDS | 50453 | 50507 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03765.14 | CRAL_TRIO_N | 9 | 58 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.