PH01004770G0130's details annotation
1.Annotation
ICBR annotation: cytochrome c, putative, expressed
Blast result AT4G10040 : 4.00E-59
Blast annotation: cytochrome c-2
2.Location
Scaffold: PH01004770
Strand: -
| Region | Start | End |
| gene | 82491 | 84480 |
| mRNA | 82491 | 84480 |
| exon | 82491 | 82644 |
| exon | 83589 | 83722 |
| exon | 84369 | 84480 |
| CDS | 82549 | 82644 |
| CDS | 83589 | 83722 |
| CDS | 84369 | 84480 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000707 | CAMK_CDPK (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00034.20 | Cytochrom_C | 13 | 109 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005506 | iron ion binding |
| GO:0009055 | electron carrier activity |
| GO:0020037 | heme binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.