PH01004885G0040's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G44670 : 2.00E-110
Blast annotation: Domain of unknown function (DUF23)
2.Location
Scaffold: PH01004885
Strand: +
| Region | Start | End |
| gene | 35688 | 43061 |
| mRNA | 35688 | 43061 |
| exon | 35688 | 39282 |
| exon | 39529 | 39572 |
| exon | 40599 | 40654 |
| exon | 40971 | 41234 |
| exon | 41996 | 43061 |
| CDS | 38054 | 39282 |
| CDS | 39529 | 39572 |
| CDS | 40599 | 40654 |
| CDS | 40971 | 41234 |
| CDS | 41996 | 42085 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01697.26 | Glyco_transf_92 | 263 | 511 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.