PH01004931G0030's details annotation
1.Annotation
ICBR annotation: fructose-1,6-bisphosphatase, putative, expressed
Blast result AT1G43670 : 5.50E-94
Blast annotation: Inositol monophosphatase family protein
2.Location
Scaffold: PH01004931
Strand: -
| Region | Start | End |
| gene | 25763 | 37018 |
| mRNA | 25763 | 37018 |
| exon | 25763 | 26155 |
| exon | 26470 | 26545 |
| exon | 26634 | 26720 |
| exon | 26845 | 26910 |
| exon | 26990 | 27060 |
| exon | 27132 | 27218 |
| exon | 27305 | 27418 |
| exon | 36449 | 37018 |
| CDS | 26042 | 26155 |
| CDS | 26470 | 26545 |
| CDS | 26634 | 26720 |
| CDS | 26845 | 26910 |
| CDS | 26990 | 27060 |
| CDS | 27132 | 27218 |
| CDS | 27305 | 27418 |
| CDS | 36449 | 36487 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000075 | regulation of transcription, DNA-dependent, sequence-specific DNA binding transcription factor activity, integral to membrane, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00316.19 | FBPase | 13 | 77 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005975 | carbohydrate metabolic process |
| GO:0042132 | fructose 1,6-bisphosphate 1-phosphatase activity |
| GO:0042578 | phosphoric ester hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.