PH01004983G0050's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01004983
Strand: -
| Region | Start | End |
| gene | 18279 | 22767 |
| mRNA | 18279 | 22767 |
| exon | 18279 | 19771 |
| exon | 20374 | 20462 |
| exon | 20852 | 21027 |
| exon | 21088 | 21171 |
| exon | 21246 | 21363 |
| exon | 21412 | 21567 |
| exon | 22133 | 22767 |
| CDS | 18876 | 19771 |
| CDS | 20374 | 20462 |
| CDS | 20852 | 21027 |
| CDS | 21088 | 21171 |
| CDS | 21246 | 21363 |
| CDS | 21412 | 21567 |
| CDS | 22133 | 22272 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000078 | RLK-Pelle_LRR-V (from iTAK) RNA_degradation |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10263.8 | SprT-like | 49 | 153 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.