PH01005158G0050's details annotation
1.Annotation
ICBR annotation: methyltransferase, putative, expressed
Blast result AT5G64030 : 1.30E-46
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01005158
Strand: -
| Region | Start | End |
| gene | 57463 | 60794 |
| mRNA | 57463 | 60794 |
| exon | 57463 | 58143 |
| exon | 58220 | 58548 |
| exon | 58776 | 60794 |
| CDS | 57968 | 58143 |
| CDS | 58220 | 58548 |
| CDS | 58776 | 60229 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03141.15 | Methyltransf_29 | 486 | 595 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.