PH01005323G0100's details annotation
1.Annotation
ICBR annotation: UPF0041 domain containing protein, putative, expressed
Blast result AT5G20090 : 4.60E-31
Blast annotation: Uncharacterised protein family (UPF0041)
2.Location
Scaffold: PH01005323
Strand: -
| Region | Start | End |
| gene | 43831 | 46845 |
| mRNA | 43831 | 46845 |
| exon | 43831 | 44352 |
| exon | 44513 | 44564 |
| exon | 45262 | 45332 |
| exon | 45419 | 45473 |
| exon | 46077 | 46845 |
| CDS | 44312 | 44352 |
| CDS | 44513 | 44564 |
| CDS | 45262 | 45332 |
| CDS | 45419 | 45473 |
| CDS | 46077 | 46172 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03650.12 | MPC | 5 | 83 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.