Annotation of co-expression genes

PH01005347G0090's details annotation

1.Annotation

ICBR annotation: KH domain containing protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01005347
Strand: +

RegionStartEnd
gene5054153704
mRNA5054153704
exon5054151886
exon5197552055
exon5276053704
CDS5181451886
CDS5197552055
CDS5276052938

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.