Annotation of co-expression genes

PH01005385G0130's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01005385
Strand: -

RegionStartEnd
gene6382464787
mRNA6382464787
exon6382464787
CDS6423964787

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000328amino_acid_transmembrane_transport
amino acid transmembrane transporter activity,
cell redox homeostasis,

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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