PH01005436G0050's details annotation
1.Annotation
ICBR annotation: TKL_IRAK_DUF26-lc22 - DUF26 kinases have homology to DUF26 containing loci, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01005436
Strand: +
| Region | Start | End |
| gene | 54774 | 61061 |
| mRNA | 54774 | 61061 |
| exon | 54774 | 55899 |
| exon | 56462 | 56808 |
| exon | 57403 | 57440 |
| exon | 57817 | 57911 |
| exon | 58380 | 58499 |
| exon | 59407 | 61061 |
| CDS | 55834 | 55899 |
| CDS | 56462 | 56808 |
| CDS | 57403 | 57440 |
| CDS | 57817 | 57911 |
| CDS | 58380 | 58499 |
| CDS | 59407 | 59754 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001370 | proteasome complex, regulation of protein catabolic process, enzyme regulator activity, Proteasome binding, small protein activating enzyme activity, RNA metabolic process, cellular protein modification process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01657.16 | Stress-antifung | 29 | 125 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.