Annotation of co-expression genes

PH01005503G0090's details annotation

1.Annotation

ICBR annotation: cytidylyltransferase domain containing protein, expressed

Blast result AT2G38670 : 1.00E-142
Blast annotation: phosphorylethanolamine cytidylyltransferase 1

2.Location

Scaffold: PH01005503
Strand: +

RegionStartEnd
gene4236345582
mRNA4236345582
exon4236342850
exon4336343598
exon4379143963
exon4427544346
exon4445744524
exon4466644783
exon4494445003
exon4510045222
exon4534645582
CDS4248642850
CDS4336343598
CDS4379143963
CDS4427544346
CDS4445744524
CDS4466644783
CDS4494445003
CDS4510045222
CDS4534645417

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF01467.25CTP_transf_like72200
PF01467.25CTP_transf_like268357

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
Glycerophospholipid metabolismethanolamine-phosphate cytidylyltransferase [EC:2.7.7.14]ko00564K00967
Phosphonate and phosphinate metabolismethanolamine-phosphate cytidylyltransferase [EC:2.7.7.14]ko00440K00967

10.Gene Ontology

GO AccessionGO Annotation
GO:0003824catalytic activity
GO:0009058biosynthetic process

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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