Gene details

Annotation of co-expression genes

PH01005664G0010's details annotation

1.Annotation

ICBR annotation: ubiquitin carboxyl-terminal hydrolase family protein, expressed

Blast result AT4G31670 : 2.70E-69
Blast annotation: ubiquitin-specific protease 18

2.Location

Scaffold: PH01005664
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001353	TKL-Pl-7 (from iTAK) Others Transcription_Regulator(from iTAK)
coexpression network	CFinderM001594	Steroid_biosynthesis cholestenol delta-isomerase activity, sterol metabolic process,
coexpression network	CFinderM001788	protein folding, protein catabolic process,
coexpression network	CFinderM001816	transcription factor TFIIF complex, Basal_transcription_factors transcription initiation from RNA polymerase II promoter, protein catabolic process,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0004221	ubiquitin thiolesterase activity
GO:0006511	ubiquitin-dependent protein catabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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