PH01005854G0030's details annotation
1.Annotation
ICBR annotation: agenet domain containing protein, putative, expressed
Blast result AT4G32440 : 7.60E-49
Blast annotation: Plant Tudor-like RNA-binding protein
2.Location
Scaffold: PH01005854
Strand: -
| Region | Start | End |
| gene | 19654 | 22353 |
| mRNA | 19654 | 22353 |
| exon | 19654 | 20667 |
| exon | 20904 | 22353 |
| CDS | 19864 | 20667 |
| CDS | 20904 | 21302 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05641.11 | Agenet | 6 | 63 |
| PF03735.13 | ENT | 343 | 393 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.