Gene details

Annotation of co-expression genes

PH01005914G0060's details annotation

1.Annotation

ICBR annotation: ribosomal protein, putative, expressed

Blast result AT1G64880 : 2.00E-111
Blast annotation: Ribosomal protein S5 family protein

2.Location

Scaffold: PH01005914
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001439	CAMTA Transcription_Regulator(from PlantTFDB) sphingolipid metabolic process, glucosylceramidase activity, mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ribosome	small subunit ribosomal protein S5	ko03011	K02988

10.Gene Ontology

GO Accession	GO Annotation
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0005622	intracellular
GO:0005840	ribosome
GO:0006412	translation

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.