PH01005935G0040's details annotation
1.Annotation
ICBR annotation: importin-8, putative
Blast result AT3G59020 : 4.20E-66
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01005935
Strand: -
| Region | Start | End |
| gene | 20929 | 22882 |
| mRNA | 20929 | 22882 |
| exon | 20929 | 22121 |
| exon | 22233 | 22413 |
| exon | 22490 | 22613 |
| exon | 22743 | 22882 |
| CDS | 21954 | 22121 |
| CDS | 22233 | 22413 |
| CDS | 22490 | 22613 |
| CDS | 22743 | 22872 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08506.9 | Cse1 | 12 | 106 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
| GO:0006886 | intracellular protein transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.