PH01005981G0060's details annotation
1.Annotation
ICBR annotation: deoxyhypusine synthase, putative, expressed
Blast result AT5G05920 : 3.80E-13
Blast annotation: deoxyhypusine synthase
2.Location
Scaffold: PH01005981
Strand: -
| Region | Start | End |
| gene | 38060 | 43070 |
| mRNA | 38060 | 43070 |
| exon | 38060 | 38805 |
| exon | 39068 | 39218 |
| exon | 40167 | 40227 |
| exon | 41226 | 41406 |
| exon | 41780 | 41869 |
| exon | 41988 | 42057 |
| exon | 42248 | 43070 |
| CDS | 38691 | 38805 |
| CDS | 39068 | 39218 |
| CDS | 40167 | 40227 |
| CDS | 41226 | 41406 |
| CDS | 41780 | 41869 |
| CDS | 41988 | 42057 |
| CDS | 42248 | 42371 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01916.16 | DS | 178 | 223 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008612 | peptidyl-lysine modification to hypusine |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.