PH01006027G0040's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G19290 : 1.80E-37
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01006027
Strand: +
| Region | Start | End |
| gene | 24215 | 27731 |
| mRNA | 24215 | 27731 |
| exon | 24215 | 25058 |
| exon | 25507 | 26436 |
| exon | 26654 | 27029 |
| exon | 27463 | 27516 |
| exon | 27639 | 27731 |
| CDS | 24603 | 25058 |
| CDS | 25507 | 26436 |
| CDS | 26654 | 27029 |
| CDS | 27463 | 27516 |
| CDS | 27639 | 27700 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12146.7 | Hydrolase_4 | 50 | 138 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.