PH01006594G0080's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G53620 : 2.00E-110
Blast annotation: -
2.Location
Scaffold: PH01006594
Strand: -
| Region | Start | End |
| gene | 25961 | 31649 |
| mRNA | 25961 | 31649 |
| exon | 25961 | 26629 |
| exon | 26708 | 26806 |
| exon | 27108 | 27401 |
| exon | 27484 | 27606 |
| exon | 27691 | 27897 |
| exon | 27992 | 28207 |
| exon | 28489 | 28722 |
| exon | 28870 | 29040 |
| exon | 29523 | 29634 |
| exon | 30032 | 30087 |
| exon | 30180 | 30327 |
| exon | 30875 | 31170 |
| exon | 31249 | 31649 |
| CDS | 26087 | 26629 |
| CDS | 26708 | 26806 |
| CDS | 27108 | 27401 |
| CDS | 27484 | 27606 |
| CDS | 27691 | 27897 |
| CDS | 27992 | 28207 |
| CDS | 28489 | 28722 |
| CDS | 28870 | 29040 |
| CDS | 29523 | 29634 |
| CDS | 30032 | 30087 |
| CDS | 30180 | 30327 |
| CDS | 30875 | 31170 |
| CDS | 31249 | 31422 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.