PH01007640G0020's details annotation
1.Annotation
ICBR annotation: 14-3-3 protein, putative, expressed
Blast result AT3G02520 : 6.30E-55
Blast annotation: general regulatory factor 7
2.Location
Scaffold: PH01007640
Strand: -
| Region | Start | End |
| gene | 5036 | 8975 |
| mRNA | 5036 | 8975 |
| exon | 5036 | 5568 |
| exon | 5656 | 5898 |
| exon | 7026 | 7199 |
| exon | 8148 | 8270 |
| exon | 8421 | 8493 |
| exon | 8610 | 8975 |
| CDS | 5461 | 5568 |
| CDS | 5656 | 5898 |
| CDS | 7026 | 7199 |
| CDS | 8148 | 8270 |
| CDS | 8421 | 8493 |
| CDS | 8610 | 8941 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00244.19 | 2014/3/3 | 15 | 135 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0019904 | protein domain specific binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.