PH01007832G0020's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G35780 : 5.80E-54
Blast annotation: -
2.Location
Scaffold: PH01007832
Strand: -
| Region | Start | End |
| gene | 12544 | 18633 |
| mRNA | 12544 | 18633 |
| exon | 12544 | 13182 |
| exon | 14141 | 14384 |
| exon | 14445 | 14744 |
| exon | 15697 | 15835 |
| exon | 15992 | 16065 |
| exon | 18239 | 18633 |
| CDS | 12947 | 13182 |
| CDS | 14141 | 14384 |
| CDS | 14445 | 14744 |
| CDS | 15697 | 15835 |
| CDS | 15992 | 16065 |
| CDS | 18239 | 18415 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13266.5 | DUF4057 | 59 | 312 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.