PH01106225G0010's details annotation
1.Annotation
ICBR annotation: aldehyde dehydrogenase, putative, expressed
Blast result AT3G24503 : 1.90E-40
Blast annotation: aldehyde dehydrogenase 2C4
2.Location
Scaffold: PH01106225
Strand: -
| Region | Start | End |
| gene | 35 | 722 |
| mRNA | 35 | 722 |
| exon | 35 | 56 |
| exon | 364 | 722 |
| CDS | 35 | 56 |
| CDS | 364 | 722 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000061 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00171.21 | Aldedh | 1 | 120 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.