PH01155911G0010's details annotation
1.Annotation
ICBR annotation: protein kinase domain containing protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01155911
Strand: -
| Region | Start | End |
| gene | 41 | 709 |
| mRNA | 41 | 709 |
| exon | 41 | 440 |
| exon | 490 | 709 |
| CDS | 379 | 440 |
| CDS | 490 | 709 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000648 | methylmalonate-semialdehyde dehydrogenase (acylating) activity, oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, |
| coexpression network | CFinderM001448 | proton-transporting two-sector ATPase complex, catalytic domain, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP hydrolysis coupled proton transport, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.