PH01180127G0010's details annotation
1.Annotation
ICBR annotation: hypothetical_protein
Blast result AT5G50290 : 2.00E-35
Blast annotation: -
2.Location
Scaffold: PH01180127
Strand: -
| Region | Start | End |
| gene | 5 | 345 |
| mRNA | 5 | 345 |
| exon | 5 | 345 |
| CDS | 5 | 345 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000166 | Ribosome translation, Ribosome structural constituent of ribosome, intracellular, mitochondrial envelope, cytochrome-c oxidase activity, polysaccharide_binding ubiquitin thiolesterase activity, Oxidative_phosphorylation ubiquitin-dependent protein catabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13947.5 | GUB_WAK_bind | 16 | 91 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0030247 | polysaccharide binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.