Annotation of co-expression genes

PH01186739G0010's details annotation

1.Annotation

ICBR annotation: transferase family protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01186739
Strand: -

RegionStartEnd
gene44613
mRNA44613
exon44613
CDS44613

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000223
coexpression networkCFinderM000344signal peptidase complex,
Protein_export
methylation,
signal peptide processing,
nucleobase-containing compound metabolic process,

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF02458.14Transferase16184

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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