PH01236745G0010's details annotation
1.Annotation
ICBR annotation: multidrug resistance protein, putative, expressed
Blast result AT2G36910 : 3.90E-39
Blast annotation: ATP binding cassette subfamily B1
2.Location
Scaffold: PH01236745
Strand: +
| Region | Start | End |
| gene | 1 | 487 |
| mRNA | 1 | 487 |
| exon | 1 | 173 |
| exon | 317 | 487 |
| CDS | 1 | 173 |
| CDS | 317 | 487 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000059 | CSD Transcription_Regulator(from iTAK) Ubiquitin_mediated_proteolysis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00005.26 | ABC_tran | 2 | 88 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0016887 | ATPase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.