CFinderM000035's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
ubiquitin-dependent protein catabolic process,0.037615402GO:0006511

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000494G0590Protein of unknown function, DUF538AT5G46230 (6.90E-32)
PH01000944G0250loricrin-relatedAT5G64550 (2.00E-171)
PH01000947G0460loricrin-relatedAT5G64550 (5.00E-175)
PH01000948G0120translocon at inner membrane of chloroplasts 21AT2G15290 (1.40E-37)
PH01001678G0250ubiquitin-specific protease 23AT5G57990 (2.20E-65)
PH01002329G0070Family of unknown function (DUF572) AT1G17130 (2.80E-90)
PH01003418G0140temperature sensing protein-relatedAT4G05440 (1.10E-41)
PH01003503G0210NC domain-containing protein-relatedAT3G02700 (4.20E-79)
PH01003660G0050RING/U-box superfamily proteinAT3G58030 (2.50E-28)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000027Butanoate_metabolism
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
intracellular membrane-bounded organelle,
pyruvate dehydrogenase (acetyl-transferring) activity,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
vesicle docking involved in exocytosis,
Endocytosis
details
CFinderM000099protein dephosphorylation,
protein serine/threonine phosphatase activity,
details
CFinderM000246Protein_processing_in_endoplasmic_reticulum
details
CFinderM000351katanin_complex
SAGA-type_complex
details
CFinderM000575Protein_processing_in_endoplasmic_reticulum
zinc ion binding,
details
CFinderM000592transcription, DNA-dependent,
cytoplasm,
details
CFinderM001023vesicle docking involved in exocytosis,
vesicle-mediated transport,
details
CFinderM001119cysteine-type peptidase activity,
ubiquitin thiolesterase activity,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001674PHD Transcription_Regulator(from iTAK)
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity,
pentose-phosphate shunt,
details

4.Expression profilings


Show details about module gene expression profiling