CFinderM000038's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
bHLH Transcription_Regulator(from PlantTFDB)0.014402941GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000005G4060Galactose oxidase/kelch repeat superfamily proteinAT3G07720 (8.00E-127)
PH01000012G1880-- (-)
PH01000034G2110TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14AT3G47620 (5.10E-33)
PH01000066G1670Major facilitator superfamily proteinAT1G22540 (5.00E-131)
PH01000102G1270calmodulin-binding family proteinAT3G13600 (7.00E-161)
PH01000111G0470Pyridoxal phosphate (PLP)-dependent transferases superfamily proteinAT3G22200 (3.00E-122)
PH01000121G1030-- (-)
PH01000196G0930Xanthine/uracil permease family proteinAT5G50300 (4.00E-176)
PH01000206G0500Polyketide cyclase/dehydrase and lipid transport superfamily proteinAT5G05440 (1.30E-58)
PH01000268G0810-- (-)
PH01000287G1160Phosphoglycerate mutase family proteinAT3G60450 (6.70E-60)
PH01000347G0200BAX inhibitor 1AT5G47120 (1.60E-78)
PH01000599G0590basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT5G48560 (2.60E-31)
PH01000871G0120metacaspase 4AT1G79340 (2.00E-117)
PH01000898G0410Peroxidase superfamily proteinAT5G05340 (1.70E-94)
PH01001042G0210basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT3G19500 (1.80E-25)
PH01001080G0230related to AP2 12AT1G53910 (2.20E-32)
PH01001158G0320Homeodomain-like superfamily proteinAT1G64570 (4.00E-136)
PH01001240G0120Raffinose synthase family proteinAT5G20250 (0.00E+00)
PH01001293G0310tubulin beta 8AT5G23860 (1.10E-31)
PH01001378G0510phosphate starvation-induced gene 2AT1G73010 (3.20E-87)
PH01001741G0220Protein of unknown function (DUF579)AT1G27930 (2.00E-62)
PH01002295G0190xyloglucan endotransglucosylase/hydrolase 8AT1G11545 (4.00E-107)
PH01002412G0140plasma membrane intrinsic protein 2AAT3G53420 (3.00E-134)
PH01002804G0160Protein of unknown function, DUF538AT1G61667 (3.50E-38)
PH01002823G0120plantacyaninAT2G02850 (3.60E-29)
PH01002849G0250-AT5G62900 (2.10E-28)
PH01003078G0310glycosyl hydrolase 9C2AT1G64390 (5.00E-159)
PH01004390G0110NAC domain containing protein 74AT4G28530 (1.40E-58)
PH01004624G0020little nuclei4AT5G65770 (1.00E-164)
PH01004678G00902-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT3G11150 (4.40E-22)
PH01004870G0100basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT4G37850 (5.10E-30)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000041Oxidative_phosphorylation
respiratory electron transport chain,
mitochondrial inner membrane,
details
CFinderM000042exocyst,
Galactose_metabolism
lipid biosynthetic process,
exocytosis,
details
CFinderM000140Ribosome
translation,
Ribosome
structural constituent of ribosome,
intracellular,
details
CFinderM000166Ribosome
translation,
Ribosome
structural constituent of ribosome,
intracellular,
mitochondrial envelope,
cytochrome-c oxidase activity,
polysaccharide_binding
ubiquitin thiolesterase activity,
Oxidative_phosphorylation
ubiquitin-dependent protein catabolic process,
details
CFinderM000173response to oxidative stress,
peroxidase activity,
heme binding,
oxidation-reduction process,
Phenylpropanoid_biosynthesis
Phenylalanine_metabolism
Methane_metabolism
details
CFinderM000175Ribosome
translation,
Ribosome
small ribosomal subunit,
structural constituent of ribosome,
intracellular,
eukaryotic translation elongation factor 1 complex,
translational elongation,
translation elongation factor activity,
details
CFinderM000431Porphyrin_and_chlorophyll_metabolism
C2C2-Dof Transcription_Regulator(from iTAK)
HB-BELL Transcription_Regulator(from iTAK)
TRAF Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
oxygen-dependent protoporphyrinogen oxidase activity,
details
CFinderM000519LIM Transcription_Regulator(from iTAK)
mitochondrial inner membrane,
details
CFinderM000594negative regulation of apoptotic process,
transporter activity,
transport,
xyloglucan:xyloglucosyl transferase activity,
microtubule-based process,
cellular glucan metabolic process,
protein polymerization,
protein complex,
microtubule,
details
CFinderM000767transport,
transporter activity,
membrane,
acid phosphatase activity,
cysteine-type endopeptidase activity,
details
CFinderM000910translation,
phosphopyruvate hydratase complex,
Ribosome
intracellular,
small ribosomal subunit,
phosphopyruvate hydratase activity,
structural constituent of ribosome,
glycolysis,
Methane_metabolism
RNA_degradation
Glycolysis_/_Gluconeogenesis
details
CFinderM001035GT14 GlycosylTransferases
CAMTA Transcription_Regulator(from PlantTFDB)
microtubule,
protein complex,
RNA_degradation
Phagosome
details
CFinderM001126negative_regulation_of_transcription,_DNA-templated
RNA_degradation
details
CFinderM001381CAMTA Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings


Show details about module gene expression profiling