CFinderM000109's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Glyoxylate_and_dicarboxylate_metabolism3.23E-06KEGG
Peroxisome4.59E-06KEGG
FMN binding,0.001274678GO:0010181
Alanine,_aspartate_and_glutamate_metabolism0.00142715KEGG
Glycine,_serine_and_threonine_metabolism0.00142715KEGG
catalytic activity,0.033409641GO:0003824

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000145G1150Sec14p-like phosphatidylinositol transfer family proteinAT2G21520 (0.00E+00)
PH01000183G0180-- (-)
PH01000283G0400Aldolase-type TIM barrel family proteinAT3G14420 (2.00E-177)
PH01000361G0560Aldolase-type TIM barrel family proteinAT3G14420 (2.00E-175)
PH01000411G0830alanine:glyoxylate aminotransferaseAT2G13360 (0.00E+00)
PH01001108G0350-AT2G42975 (2.60E-24)
PH01001155G0390basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT4G00050 (9.20E-22)
PH01001955G0240-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000189phosphate ion transport,
cellular carbohydrate metabolic process,
malate metabolic process,
L-malate dehydrogenase activity,
inorganic phosphate transmembrane transporter activity,
malate dehydrogenase activity,
Carbon_fixation_in_photosynthetic_organisms
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glyoxylate_and_dicarboxylate_metabolism
details
CFinderM000235proton-transporting ATP synthase complex, coupling factor F(o),
intracellular,
Photosynthesis
Oxidative_phosphorylation
ATP synthesis coupled proton transport,
hydrogen ion transmembrane transporter activity,
details
CFinderM000392malate_transport
Peroxisome
Glyoxylate_and_dicarboxylate_metabolism
glycopeptide_alpha-N-acetylgalactosaminidase_activity
serine-type carboxypeptidase activity,
FMN binding,
details
CFinderM000500WRKY Transcription_Regulator(from PlantTFDB)
sequence-specific DNA binding,
sequence-specific DNA binding transcription factor activity,
details
CFinderM000659ATP-dependent peptidase activity,
details
CFinderM000892Valine,_leucine_and_isoleucine_degradation
cellular aldehyde metabolic process,
aldehyde dehydrogenase [NAD(P)+] activity,
details
CFinderM001423Glycine,_serine_and_threonine_metabolism
intracellular,
Arachidonic_acid_metabolism
glutathione peroxidase activity,
details
CFinderM001540DNA polymerase III complex,
alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
Terpenoid_backbone_biosynthesis
3-hydroxyacyl-CoA_dehydrogenase_activity
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
peptide-methionine-(S)-S-oxide reductase activity,
fatty acid metabolic process,
terpenoid biosynthetic process,
iron-sulfur cluster assembly,
details
CFinderM001642cis-Golgi network,
peptide-methionine_(R)-S-oxide_reductase_activity
details
CFinderM001663DNA polymerase III complex,
GRAS Transcription_Regulator(from PlantTFDB)
DNA_replication
DNA-directed DNA polymerase activity,
details

4.Expression profilings