CFinderM000118's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000056G1510ubiquitin-specific protease 24AT4G30890 (7.00E-126)
PH01000068G1090RAB GTPase homolog A5AAT5G47520 (7.10E-88)
PH01000260G1140-- (-)
PH01000292G0060N-MYC downregulated-like 1AT5G56750 (2.00E-150)
PH01000358G0180N-MYC downregulated-like 1AT5G56750 (4.00E-145)
PH01000510G0060acyl-CoA binding protein 4AT3G05420 (6.00E-109)
PH01000706G0160DegP protease 9AT5G40200 (9.00E-112)
PH01000802G0150Translation elongation factor EF1B/ribosomal protein S6 family proteinAT3G18760 (4.50E-11)
PH01000876G0080-- (-)
PH01001673G0080-AT4G28200 (1.90E-99)
PH01002526G0190-- (-)
PH01002814G0160-- (-)
PH01003062G0160Actin-binding FH2 (formin homology 2) family proteinAT3G05470 (4.00E-126)
PH01005364G0080Pectinacetylesterase family proteinAT3G05910 (5.00E-123)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000155details
CFinderM000336C2C2-LSD Transcription_Regulator(from iTAK)
LSD Transcription_Regulator(from PlantTFDB)
cellulose biosynthetic process,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM000792GT31 GlycosylTransferases
fatty-acyl-CoA binding,
details
CFinderM001116protein folding,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001117LSD Transcription_Regulator(from PlantTFDB)
C2C2-LSD Transcription_Regulator(from iTAK)
details
CFinderM001705Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
chloroplast,
histone-lysine N-methyltransferase activity,
histone_binding
ubiquitin-dependent protein catabolic process,
details
CFinderM001742GT31 GlycosylTransferases
Basal_transcription_factors
fatty-acyl-CoA binding,
TBP-class_protein_binding
ubiquitin-dependent protein catabolic process,
protein glycosylation,
galactosyltransferase activity,
ubiquitin thiolesterase activity,
details

4.Expression profilings


Show details about module gene expression profiling