CFinderM000160's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_LRK10L-2 (from iTAK)0.00617205GFam
SNARE_interactions_in_vesicular_transport0.008408023KEGG
transport,0.032951213GO:0006810
cell wall macromolecule catabolic process,0.032951213GO:0016998
chitin catabolic process,0.032951213GO:0006032
transmembrane transport,0.032951213GO:0055085

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000024G1360syntaxin of plants 71AT3G09740 (2.70E-99)
PH01000089G0510homolog of carrot EP3-3 chitinaseAT3G54420 (7.90E-29)
PH01000117G0090Plant protein of unknown function (DUF247)AT2G36430 (4.20E-50)
PH01000977G0180sugar transporter 1AT1G11260 (1.00E-148)
PH01001172G0450multidrug resistance-associated protein 4AT2G47800 (8.10E-36)
PH01002549G0190Glycosyl hydrolase superfamily proteinAT4G16260 (4.10E-81)
PH01003605G0020-- (-)
PH01003701G0010PR5-like receptor kinaseAT5G38280 (1.80E-87)
PH01015374G0010Protein kinase family protein with leucine-rich repeat domainAT5G25930 (2.00E-97)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000063SNARE_interactions_in_vesicular_transport
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
GTnc GlycosylTransferases
RLK-Pelle_LRR-XI-1 (from iTAK)
protein phosphorylation,
details
CFinderM000084cell wall macromolecule catabolic process,
chitin catabolic process,
WRKY Transcription_Regulator(from PlantTFDB)
defense response to fungus,
ammonium_transport
ammonium_transmembrane_transport
defense response to bacterium,
metabolic process,
chitinase activity,
details
CFinderM000159chitin binding,
chitin catabolic process,
cell wall macromolecule catabolic process,
chitinase activity,
ATP binding,
ATPase activity,
SNARE_interactions_in_vesicular_transport
carbohydrate metabolic process,
protein phosphorylation,
transport,
transmembrane transport,
RLK-Pelle_LRR-VIII-1 (from iTAK)
RLK-Pelle_LRK10L-2 (from iTAK)
details
CFinderM000199RLK-Pelle_LRR-VIII-1 (from iTAK)
details
CFinderM000213RLK-Pelle_RLCK-II (from iTAK)
GH17 Glycoside_Hydrolases
extracellular region,
ammonia-lyase activity,
details
CFinderM000277Valine,_leucine_and_isoleucine_biosynthesis
Alanine,_aspartate_and_glutamate_metabolism
SNARE_interactions_in_vesicular_transport
fructose-bisphosphate aldolase activity,
glycolysis,
details
CFinderM000286chitin binding,
chitin catabolic process,
cell wall macromolecule catabolic process,
chitinase activity,
Amino_sugar_and_nucleotide_sugar_metabolism
carbohydrate metabolic process,
details
CFinderM000287thiamine biosynthetic process,
Pyruvate_metabolism
Carbon_fixation_in_photosynthetic_organisms
iron-sulfur cluster binding,
Zeatin_biosynthesis
Thiamine_metabolism
details
CFinderM000412chitin binding,
cell wall macromolecule catabolic process,
chitin catabolic process,
chitinase activity,
details
CFinderM000695STE_STE11 (from iTAK)
RLK-Pelle_RLCK-VIIa-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
details
CFinderM000698RLK-Pelle_L-LEC (from iTAK)
cellular aldehyde metabolic process,
Caffeine_metabolism
Valine,_leucine_and_isoleucine_degradation
Lysine_degradation
Chloroalkane_and_chloroalkene_degradation
beta-Alanine_metabolism
SNARE_interactions_in_vesicular_transport
Limonene_and_pinene_degradation
Histidine_metabolism
Propanoate_metabolism
Tryptophan_metabolism
Drug_metabolism_-_other_enzymes
details
CFinderM000811RLK-Pelle_CrRLK1L-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
details
CFinderM000892Valine,_leucine_and_isoleucine_degradation
cellular aldehyde metabolic process,
aldehyde dehydrogenase [NAD(P)+] activity,
details
CFinderM000907SNARE_interactions_in_vesicular_transport
details
CFinderM001050SNARE_interactions_in_vesicular_transport
details
CFinderM001076chitin catabolic process,
cell wall macromolecule catabolic process,
chitin binding,
protein dephosphorylation,
details
CFinderM001274mitochondrial ribosome,
protein folding,
SNARE_interactions_in_vesicular_transport
PHD Transcription_Regulator(from iTAK)
details
CFinderM001288HB-KNOX Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Amino_sugar_and_nucleotide_sugar_metabolism
Glutathione_metabolism
SNARE_interactions_in_vesicular_transport
Ascorbate_and_aldarate_metabolism
details
CFinderM001562HB-KNOX Transcription_Regulator(from iTAK)
sterol_24-C-methyltransferase_activity
TALE Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
Steroid_biosynthesis
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Ascorbate_and_aldarate_metabolism
details

4.Expression profilings


Show details about module gene expression profiling