CFinderM000201's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_CrRLK1L-1 (from iTAK)0.004119137GFam
5'-3' exoribonuclease activity,0.021966918GO:0004534
nucleobase-containing compound metabolic process,0.02969811GO:0006139
Ribosome_biogenesis_in_eukaryotes0.030405325KEGG
RNA_degradation0.030405325KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000174G0870exoribonuclease 4AT1G54490 (0.00E+00)
PH01000685G0620bindingAT3G06670 (2.00E-152)
PH01001371G0320Galactosyl transferase GMA12/MNN10 family proteinAT5G07720 (0.00E+00)
PH01001502G0010Malectin/receptor-like protein kinase family proteinAT3G51550 (0.00E+00)
PH01001589G0120-AT3G06150 (2.00E-165)
PH01004294G0040C2H2 zinc-finger protein SERRATE (SE)AT2G27100 (1.00E-171)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000112SNF2 Transcription_Regulator(from iTAK)
chromatin remodeling,
ATP-dependent chromatin remodeling,
CE8 Carbohydrate_Esterases
nucleic acid binding,
helicase activity,
5'-3' exoribonuclease activity,
nucleosome binding,
GT1 GlycosylTransferases
cell wall modification,
nucleus,
cell wall,
nucleobase-containing compound metabolic process,
exonuclease activity,
details
CFinderM000733TBP-class_protein_binding
positive_regulation_of_transcription,_DNA-templated
WASH_complex
outer membrane,
transcription initiation, DNA-dependent,
zinc ion binding,
details
CFinderM001305SNF2 Transcription_Regulator(from iTAK)
5'-3' exoribonuclease activity,
nucleic acid binding,
intracellular,
large ribosomal subunit,
nucleobase-containing compound metabolic process,
exonuclease activity,
details
CFinderM001679PHD Transcription_Regulator(from iTAK)
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
nucleotidyltransferase activity,
serine-type carboxypeptidase activity,
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
details
CFinderM001812intracellular transport,
5'-3' exoribonuclease activity,
nucleobase-containing compound metabolic process,
exonuclease activity,
Ribosome_biogenesis_in_eukaryotes
RNA_degradation
details

4.Expression profilings