CFinderM000216's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000000G13302-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT5G24530 (4.80E-69)
PH01000000G14002-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT5G24530 (7.90E-46)
PH01000594G0200-- (-)
PH01000594G0210lipoxygenase 2AT3G45140 (7.30E-50)
PH01001096G0120ethylene-dependent gravitropism-deficient and yellow-green-like 3AT1G17870 (0.00E+00)
PH01001184G0510protein kinase 2AAT1G14370 (5.90E-83)
PH01004263G0010wall-associated kinase 2AT1G21270 (2.00E-149)
PH01004728G0030basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT5G57150 (7.50E-36)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000251RLK-Pelle_LRR-XII-1 (from iTAK)
endoplasmic reticulum,
WRKY Transcription_Regulator(from PlantTFDB)
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen,
lipoxygenase activity,
protein binding,
details

4.Expression profilings

Created with Highcharts 4.1.6Gene expression profiling among different tissue samples02468leaf_SRR2035212leaf_SRR2035327leaf_SRR4450543_CKleaf_SRR4450545_Dehydrationleaf_SRR4450547_Dehydrationleaf_SRR4450549_Coldleaf_SRR4450551_ColdLeaf-2Leaf_ERR105068Root_1Root_3Root_5Root_ERR105075RhizomeRhizome_ERR105074culm_SRR1187864shoot_SAM_Ashoot_MIN_Cshoot_YNO_Ashoot_YNO_Cshoot_MNO_Ashoot_MNO_Cshoot_SAM_Cshoot_YIN_Ashoot_YIN_Cshoot_MIN_Ashoot_SRR3050072shoot_SRR3056056shoot_SRR3521411Shoot_A2Shoot_B1Shoot_B3Shoot_C2Shoot_D1Shoot_D3Bud_1Bud_3panicle_early_ERR105069panicle_flowering_ERR105071PH01000000G1330PH01000000G1400PH01000594G0200PH01000594G0210PH01001096G0120PH01001184G0510PH01004263G0010PH01004728G0030Highcharts.com