CFinderM000291's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
extracellular matrix,0.005670457GO:0031012

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G0660-- (-)
PH01000034G1470somatic embryogenesis receptor-like kinase 1AT1G71830 (2.00E-117)
PH01000305G0050glutaredoxin-relatedAT3G11920 (1.00E-104)
PH01000393G0510beta-1,3-glucanase 2AT3G57260 (5.40E-81)
PH01000401G0180matrix metalloproteinaseAT1G70170 (8.20E-89)
PH01000550G0160phosphate transporter 1;5AT2G32830 (3.00E-169)
PH01000609G0290ARM repeat superfamily proteinAT3G02840 (2.50E-41)
PH01001032G0520Protein of unknown function (DUF679)AT3G02430 (1.60E-30)
PH01001037G0370WRKY DNA-binding protein 33AT2G38470 (1.80E-82)
PH01002082G0090COBRA-like protein-7 precursorAT4G16120 (3.00E-166)
PH01003377G0140-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000084cell wall macromolecule catabolic process,
chitin catabolic process,
WRKY Transcription_Regulator(from PlantTFDB)
defense response to fungus,
ammonium_transport
ammonium_transmembrane_transport
defense response to bacterium,
metabolic process,
chitinase activity,
details
CFinderM000119details
CFinderM000268WRKY Transcription_Regulator(from PlantTFDB)
RLK-Pelle_LRR-II (from iTAK)
mTERF Transcription_Regulator(from iTAK)
RLK-Pelle_SD-2b (from iTAK)
RNA-dependent DNA replication,
regulation of transcription, DNA-dependent,
details
CFinderM000288RLK-Pelle_DLSV (from iTAK)
protein serine/threonine kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein kinase activity,
protein phosphorylation,
ATP binding,
GH17 Glycoside_Hydrolases
RLK-Pelle_SD-2b (from iTAK)
details
CFinderM000406WRKY Transcription_Regulator(from PlantTFDB)
GH32 Glycoside_Hydrolases
RLK-Pelle_LRR-II (from iTAK)
beta-fructofuranosidase_activity
sucrose_alpha-glucosidase_activity
mTERF Transcription_Regulator(from iTAK)
Galactose_metabolism
Protein_export
Sphingolipid_metabolism
sequence-specific DNA binding,
details

4.Expression profilings


Show details about module gene expression profiling