CFinderM000306's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein import into mitochondrial matrix,0.005155766GO:0030150
mitochondrial outer membrane translocase complex,0.007216945GO:0005742
large ribosomal subunit,0.016976844GO:0015934
transcription, DNA-dependent,0.047111733GO:0006351

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000256G0080Mitochondrial outer membrane translocase complex, subunit Tom7AT5G41685 (1.20E-14)
PH01000306G1190Transducin/WD40 repeat-like superfamily proteinAT5G14050 (1.00E-164)
PH01000990G0300Hyaluronan / mRNA binding familyAT4G16830 (1.80E-31)
PH01001887G0080-AT1G15230 (1.30E-11)
PH01001959G0390ribosomal protein L30 family proteinAT5G55140 (7.40E-37)
PH01006302G0030Transcription elongation factor (TFIIS) family proteinAT4G24200 (2.80E-50)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000014transcription, DNA-dependent,
Spliceosome
details
CFinderM000069Ribosome_biogenesis_in_eukaryotes
Ino80_complex
ATP-dependent_5'-3'_DNA_helicase_activity
rRNA (adenine-N6,N6-)-dimethyltransferase activity,
rRNA methyltransferase activity,
rRNA (adenine) methyltransferase activity,
snoRNA binding,
snRNA_pseudouridine_synthesis
rRNA modification,
details
CFinderM000077transcription, DNA-dependent,
details
CFinderM000129GH9 Glycoside_Hydrolases
RLK-Pelle_LRR-IV (from iTAK)
details
CFinderM000205RLK-Pelle_LRR-XI-2 (from iTAK)
mRNA processing,
details
CFinderM000241signal peptidase complex,
Protein_export
signal peptide processing,
details
CFinderM000259transcription, DNA-dependent,
RNA_polymerase
Purine_metabolism
Pyrimidine_metabolism
details
CFinderM000307amine metabolic process,
quinone binding,
copper ion binding,
protein import into mitochondrial matrix,
mitochondrial outer membrane translocase complex,
Ribosome_biogenesis_in_eukaryotes
transcription, DNA-dependent,
details
CFinderM000411transcription, DNA-dependent,
nucleus,
bHLH Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings