CFinderM000352's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ribosome0.000271788KEGG
translation,0.000323586GO:0006412
Ribosome0.000329968KEGG
intracellular,0.001063177GO:0005622
structural constituent of ribosome,0.001723225GO:0003735
translational initiation,0.020991612GO:0006413
transcription, DNA-dependent,0.036589329GO:0006351
RNA_polymerase0.048535124KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000054G0960Ribosomal protein L36e family proteinAT3G53740 (1.80E-43)
PH01000054G2270SAC3/GANP/Nin1/mts3/eIF-3 p25 familyAT2G39340 (0.00E+00)
PH01000395G0770novel cap-binding proteinAT5G18110 (4.30E-93)
PH01000466G0100AAA-type ATPase family proteinAT1G02890 (0)
PH01000528G0510Zinc-binding ribosomal protein family proteinAT3G10950 (5.00E-46)
PH01001641G0280Ribosomal L28e protein familyAT4G29410 (3.20E-53)
PH01001795G0410RNA polymerases N / 8 kDa subunitAT1G61700 (1.20E-31)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000068cellular protein modification process,
ubiquitin-protein ligase activity,
Ubiquitin_mediated_proteolysis
binding,
intracellular,
protein binding,
CE8 Carbohydrate_Esterases
GH28 Glycoside_Hydrolases
Alfin-like Transcription_Regulator(from iTAK)
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
TORC1_complex
details
CFinderM000353intracellular,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
Ribosome
ubiquitin-protein ligase activity,
Ribosome
translation,
methylation,
translational initiation,
nucleobase-containing compound metabolic process,
RNA_polymerase
structural constituent of ribosome,
transcription, DNA-dependent,
details
CFinderM000623intracellular,
Ribosome
translation,
structural constituent of ribosome,
HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001353TKL-Pl-7 (from iTAK)
Others Transcription_Regulator(from iTAK)
details

4.Expression profilings