CFinderM000375's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_LRR-III (from iTAK)3.75E-07GFam
protein phosphorylation,6.38E-05GO:0006468
protein kinase activity,0.000375222GO:0004672
transferase activity, transferring phosphorus-containing groups,0.000375222GO:0016772
ATP binding,0.00177528GO:0005524
RLK-Pelle_LRR-VII-1 (from iTAK)0.003653622GFam
protein binding,0.003867224GO:0005515

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000302G0200HIT zinc finger ;PAPA-1-like conserved regionAT1G56460 (2.00E-34)
PH01000331G0370Leucine-rich receptor-like protein kinase family proteinAT4G20940 (0.00E+00)
PH01000500G0260Leucine-rich receptor-like protein kinase family proteinAT4G20940 (0.00E+00)
PH01002153G0330-AT1G16630 (3.90E-13)
PH01003627G0110Leucine-rich repeat protein kinase family proteinAT5G67200 (3.00E-125)
PH01005410G0120Leucine-rich repeat protein kinase family proteinAT3G56370 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000458mTERF Transcription_Regulator(from iTAK)
details

4.Expression profilings

Created with Highcharts 4.1.6Gene expression profiling among different tissue samples02468leaf_SRR2035212leaf_SRR2035327leaf_SRR4450543_CKleaf_SRR4450545_Dehydrationleaf_SRR4450547_Dehydrationleaf_SRR4450549_Coldleaf_SRR4450551_ColdLeaf-2Leaf_ERR105068Root_1Root_3Root_5Root_ERR105075RhizomeRhizome_ERR105074culm_SRR1187864shoot_SAM_Ashoot_MIN_Cshoot_YNO_Ashoot_YNO_Cshoot_MNO_Ashoot_MNO_Cshoot_SAM_Cshoot_YIN_Ashoot_YIN_Cshoot_MIN_Ashoot_SRR3050072shoot_SRR3056056shoot_SRR3521411Shoot_A2Shoot_B1Shoot_B3Shoot_C2Shoot_D1Shoot_D3Bud_1Bud_3panicle_early_ERR105069panicle_flowering_ERR105071PH01000302G0200PH01000331G0370PH01000500G0260PH01002153G0330PH01003627G0110PH01005410G0120Highcharts.com