CFinderM000401's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cullin-RING ubiquitin ligase complex,0.007570058GO:0031461
ubiquitin protein ligase binding,0.022710173GO:0031625

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000002G4280Mitochondrial substrate carrier family proteinAT5G48970 (1.00E-109)
PH01000014G2100-- (-)
PH01000355G0570APR-like 4AT1G34780 (8.90E-35)
PH01000881G0370-- (-)
PH01001140G0590-- (-)
PH01001223G0350-- (-)
PH01001437G0220-- (-)
PH01001592G0390cullin 1AT4G02570 (5.50E-32)
PH01005708G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000136CPP Transcription_Regulator(from PlantTFDB)
details
CFinderM000371apoplast,
lignin catabolic process,
hydroquinone:oxygen_oxidoreductase_activity
details
CFinderM000400hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
details
CFinderM000830cytoskeleton,
proton-transporting ATP synthase complex, catalytic core F(1),
phagocytosis,
branched chain family amino acid biosynthetic process,
signal peptide processing,
phosphoacetylglucosamine mutase activity,
Other_glycan_degradation
details
CFinderM001349hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
cation-transporting_ATPase_activity
cation transport,
details

4.Expression profilings


Show details about module gene expression profiling