CFinderM000477's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Valine,_leucine_and_isoleucine_degradation0.003125439KEGG
ZF-HD Transcription_Regulator(from PlantTFDB)0.003934363GFam
Cyanoamino_acid_metabolism0.01949892KEGG
oxidoreductase activity, acting on the CH-CH group of donors,0.039077263GO:0016627
acyl-CoA dehydrogenase activity,0.039077263GO:0003995
Rab GTPase activator activity,0.039606446GO:0005097
Phenylpropanoid_biosynthesis0.045018905KEGG
regulation of Rab GTPase activity,0.048334657GO:0032313

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000053G1380mini zinc finger 2AT3G28917 (2.50E-24)
PH01000065G0260-AT3G12760 (7.00E-101)
PH01000428G0140isovaleryl-CoA-dehydrogenaseAT3G45300 (0.00E+00)
PH01002626G0200beta glucosidase 41AT5G54570 (0.00E+00)
PH01006816G0060methyl esterase 3AT2G23610 (1.50E-49)
PH01007504G0010DNAJ heat shock N-terminal domain-containing proteinAT1G21080 (4.00E-138)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000447CMGC_MAPK (from iTAK)
C3H Transcription_Regulator(from PlantTFDB)
ubiquitin ligase complex,
extracellular region,
details
CFinderM000538GT61 GlycosylTransferases
RLK-Pelle_PERK-1 (from iTAK)
GT47 GlycosylTransferases
Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
response to oxidative stress,
histidine_catabolic_process_to_glutamate_and_formamide
details
CFinderM000644NAC Transcription_Regulator(from PlantTFDB)
regulation of transcription, DNA-dependent,
Trihelix Transcription_Regulator(from PlantTFDB)
details
CFinderM001121HB-other Transcription_Regulator(from PlantTFDB)
transcription_regulatory_region_sequence-specific_DNA_binding
HD-ZIP Transcription_Regulator(from PlantTFDB)
regulation of transcription, DNA-dependent,
NAC Transcription_Regulator(from PlantTFDB)
DNA binding,
sequence-specific DNA binding,
sequence-specific DNA binding transcription factor activity,
Rab GTPase activator activity,
Glyoxylate_and_dicarboxylate_metabolism
Citrate_cycle_(TCA_cycle)
Lysine_biosynthesis
Carbon_fixation_pathways_in_prokaryotes
regulation of Rab GTPase activity,
nucleus,
details

4.Expression profilings