CFinderM000592's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
transcription, DNA-dependent,0.027669068GO:0006351
cytoplasm,0.049152659GO:0005737

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000004G3030-- (-)
PH01000005G3390-- (-)
PH01000006G2400Protein of unknown function (DUF1423)AT5G48160 (2.00E-117)
PH01000027G0630Purple acid phosphatases superfamily proteinAT1G13900 (0.00E+00)
PH01000081G0150RmlC-like cupins superfamily proteinAT4G14710 (3.20E-86)
PH01000103G0240histone acetyltransferase of the GNAT family 1AT3G54610 (2.10E-49)
PH01000134G1300Protein kinase superfamily proteinAT3G25840 (0.00E+00)
PH01000153G0430light-mediated development protein 1 / deetiolated1 (DET1)AT4G10180 (6.60E-62)
PH01000272G1040Patched family proteinAT1G42470 (7.80E-67)
PH01000289G1000K+ uptake permease 11AT2G35060 (0.00E+00)
PH01000314G0190-AT1G12650 (5.20E-36)
PH01000353G0690basic region/leucine zipper transcription factor 16AT2G35530 (1.30E-49)
PH01000361G0360Leucine-rich receptor-like protein kinase family proteinAT1G17230 (0.00E+00)
PH01000397G0060-- (-)
PH01000413G0570Dihydrodipicolinate reductase, bacterial/plantAT3G59890 (1.80E-36)
PH01000549G0010Tetratricopeptide repeat (TPR)-like superfamily proteinAT4G37460 (3.60E-87)
PH01000570G0520ARM repeat superfamily proteinAT5G53480 (0.00E+00)
PH01000804G0310RNA recognition motif (RRM)-containing proteinAT3G47120 (3.30E-81)
PH01000908G0440-- (-)
PH01001035G0260-- (-)
PH01001250G0160-AT3G02900 (9.00E-16)
PH01001273G0010-AT5G08450 (0.00E+00)
PH01001339G0110tRNA synthetase class II (D, K and N) family proteinAT4G33760 (1.00E-136)
PH01001364G0010-- (-)
PH01001437G0080RNA helicase, putativeAT5G47010 (2.00E-137)
PH01001452G0340bindingAT2G06210 (2.00E-103)
PH01001469G0330Maf-like proteinAT5G42770 (1.20E-66)
PH01001517G0230basic region/leucine zipper transcription factor 68AT1G32150 (3.40E-69)
PH01001543G0120non-ATPase subunit 9AT1G29150 (2.00E-173)
PH01001558G0360myb-like HTH transcriptional regulator family proteinAT2G38300 (6.50E-34)
PH01001580G0360Protein kinase superfamily proteinAT3G24190 (2.00E-120)
PH01001688G0150D111/G-patch domain-containing proteinAT5G26610 (8.80E-81)
PH01001697G0180WRKY DNA-binding protein 74AT5G28650 (3.80E-65)
PH01001785G0060RNA polymerase Rpb8AT3G59600 (1.40E-51)
PH01002093G0350SET domain group 29AT5G53430 (1.00E-150)
PH01002311G0010-AT4G36980 (6.50E-95)
PH01002329G0070Family of unknown function (DUF572) AT1G17130 (2.80E-90)
PH01002523G0140photosystem II reaction center protein AATCG00020 (0.00E+00)
PH01002725G0170mRNA capping enzyme family proteinAT3G20650 (2.00E-132)
PH01004068G0170transducin family protein / WD-40 repeat family proteinAT5G05570 (3.70E-53)
PH01004196G0130B-box type zinc finger family proteinAT4G38960 (5.10E-43)
PH01004395G0010glutamate receptor 2.7AT2G29120 (1.30E-94)
PH01005019G0010NB-ARC domain-containing disease resistance proteinAT3G07040 (6.10E-42)
PH01005222G0050CBL-interacting protein kinase 8AT4G24400 (1.00E-140)
PH01005664G0110Transducin/WD40 repeat-like superfamily proteinAT2G43770 (6.00E-149)
PH01005665G0070Aldolase-type TIM barrel family proteinAT5G13420 (1.00E-114)
PH01045106G0010-AT1G56423 (2.30E-36)
PH01157731G0010NB-ARC domain-containing disease resistance proteinAT3G14470 (7.40E-37)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000035ubiquitin-dependent protein catabolic process,
details
CFinderM000053CMGC_DYRK-PRP4 (from iTAK)
details
CFinderM000193L-methionine salvage from methylthioadenosine,
arginyl-tRNA aminoacylation,
7-methylguanosine mRNA capping,
arginine-tRNA ligase activity,
mRNA_(guanine-N7-)-methyltransferase_activity
acireductone_dioxygenase_[iron(II)-requiring]_activity
double-stranded RNA binding,
tRNA aminoacylation for protein translation,
details
CFinderM000217glycerol ether metabolic process,
RNA-dependent DNA replication,
translational initiation,
RNA metabolic process,
RNA_transport
details
CFinderM000499ARR-B Transcription_Regulator(from PlantTFDB)
GARP-ARR-B Transcription_Regulator(from iTAK)
details
CFinderM000727CAMK_CAMKL-CHK1 (from iTAK)
details
CFinderM000767transport,
transporter activity,
membrane,
acid phosphatase activity,
cysteine-type endopeptidase activity,
details
CFinderM001142details
CFinderM001247CAMTA Transcription_Regulator(from PlantTFDB)
superoxide metabolic process,
Peroxisome
Protein_export
superoxide dismutase activity,
details
CFinderM001253CMGC_CLK (from iTAK)
membrane,
details
CFinderM001267sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity,
protein binding,
myosin complex,
motor activity,
pentose-phosphate shunt,
RNA_polymerase
transcription, DNA-dependent,
Pyrimidine_metabolism
Purine_metabolism
details
CFinderM001505bZIP Transcription_Regulator(from PlantTFDB)
Spliceosome
details
CFinderM001588oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Glycine,_serine_and_threonine_metabolism
Valine,_leucine_and_isoleucine_degradation
dihydrolipoyl dehydrogenase activity,
oxoglutarate dehydrogenase (succinyl-transferring) activity,
oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor
thiamine pyrophosphate binding,
mitochondrial outer membrane,
details
CFinderM001595dephosphorylation,
Butanoate_metabolism
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
details
CFinderM001674PHD Transcription_Regulator(from iTAK)
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity,
pentose-phosphate shunt,
details

4.Expression profilings


Show details about module gene expression profiling