CFinderM000626's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
mRNA_catabolic_process2.42E-06GO:0006402
polyribonucleotide_nucleotidyltransferase_activity9.56E-06GO:0004654
CMGC_MAPK (from iTAK)0.005240081GFam
3'-5'-exoribonuclease activity,0.006115561GO:0000175
RNA binding,0.015996302GO:0003723
RNA processing,0.03488706GO:0006396
Purine_metabolism0.049296983KEGG
RNA_degradation0.049296983KEGG
Pyrimidine_metabolism0.049296983KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000041G0380Tetratricopeptide repeat (TPR)-like superfamily proteinAT3G63370 (0.00E+00)
PH01000779G0530mitogen-activated protein kinase homolog 2AT1G59580 (6.00E-150)
PH01001052G0490Pentatricopeptide repeat (PPR-like) superfamily proteinAT1G19720 (0.00E+00)
PH01001367G0390Pentatricopeptide repeat (PPR) superfamily proteinAT3G53700 (0.00E+00)
PH01002314G0120polyribonucleotide nucleotidyltransferase, putativeAT3G03710 (3.00E-115)
PH01002314G0160polyribonucleotide nucleotidyltransferase, putativeAT3G03710 (1.40E-48)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000901mRNA_catabolic_process
polyribonucleotide_nucleotidyltransferase_activity
RNA binding,
3'-5'-exoribonuclease activity,
CE8 Carbohydrate_Esterases
cell wall,
cell wall modification,
pectinesterase activity,
RNA processing,
details
CFinderM001306mRNA_catabolic_process
polyribonucleotide_nucleotidyltransferase_activity
CE8 Carbohydrate_Esterases
RNA binding,
conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA
methionyl-tRNA formyltransferase activity,
3'-5'-exoribonuclease activity,
hydroxymethyl-, formyl- and related transferase activity,
details

4.Expression profilings