CFinderM000627's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
DNA primase activity,0.009373388GO:0003896
DNA_replication0.016206806KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000232G0100SET domain-containing proteinAT3G55080 (8.70E-21)
PH01000347G0730-- (-)
PH01000620G0230DNA primasesAT5G52800 (4.50E-15)
PH01002017G0380-- (-)
PH01002891G0200TBP-associated factor 15AT1G50300 (2.00E-100)
PH01003505G0200Protein of unknown function (DUF1682)AT4G24330 (6.00E-117)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000170cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
ubiquitin-dependent protein catabolic process,
details
CFinderM000229GT2 GlycosylTransferases
NuA4_histone_acetyltransferase_complex
histone_H2A_acetylation
protein homooligomerization,
histone_H4_acetylation
chromatin remodeling,
negative_regulation_of_transcription,_DNA-templated
RNA modification,
pseudouridine synthesis,
details
CFinderM000389protein folding,
response to heat,
unfolded protein binding,
details
CFinderM000453carbon fixation,
response to wounding,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
details
CFinderM000501oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
Peroxisome
N-Glycan_biosynthesis
details
CFinderM000540condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
details
CFinderM000734WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
details
CFinderM001015DNA primase activity,
details
CFinderM001203SNARE_interactions_in_vesicular_transport
ubiquitin-dependent protein catabolic process,
details
CFinderM001242mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001248DNA primase activity,
details
CFinderM001253CMGC_CLK (from iTAK)
membrane,
details
CFinderM001261thymidylate synthase activity,
dihydrofolate reductase activity,
dTMP biosynthetic process,
ribosome biogenesis,
nucleotidyltransferase activity,
details
CFinderM001360cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
details
CFinderM001424WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
details
CFinderM001581WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
details
CFinderM001799Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings